Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13443g00001 GGATGTGATGCGTCAATTTTGTTGAACGGTGATGGAACGGAACAAAATGAAAGAGATCACCCAGCCAACTTTGGCTTAAGGGATGAAGCTATTCAGGCCATTGAAGACATTCGTGCTATTATTCGTGTGCAGTGTCCCCGTGTTGTCTCGTGCGCAGATATCCTTGTCATTGCGGCACGCGAAGCTRTTCGCCAAGTAATTATTTATTGTTGTTGA 216 0.4491 GCDASILLNGDGTEQNERDHPANFGLRDEAIQAIEDIRAIIRVQCPRVVSCADILVIAAREAXRQVIIYCC 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13443g00001 71 MobiDBLite consensus disorder prediction 1 21 - -
Trme13443g00001 71 SUPERFAMILY Heme-dependent peroxidases 1 63 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme13443g00001 71 Gene3D - 1 67 - -
Trme13443g00001 71 ProSiteProfiles Plant heme peroxidase family profile. 1 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme13443g00001 71 Pfam Peroxidase 1 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme13443g00001 71 PANTHER PEROXIDASE 25-RELATED 1 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13443g00001 Trme-Chr13443 636 851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13443g00001 1 61 Peroxidase AT5G51890 47.541 6.18e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13443g00001 K00430 - gmx:100795412 88.1965