Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1344249g00001 ATGCATGTTGTGATGAACGGTGGCGATTCAGCTTACGTGGCATTACTACCATCCGGGTTTGCTGTAGTCCCCGATGGACCTGGATCTCGTGGCTCCGAGAATGGGGACGCCACCGCAAACGGAGGCGAGTCGCGTGTTAGCGGGTCGCTTCTAACCGTGGCGTTTCAAATCCTTGTGAATAGTCTTCCAACAG 193 0.5492 MHVVMNGGDSAYVALLPSGFAVVPDGPGSRGSENGDATANGGESRVSGSLLTVAFQILVNSLPT 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1344249g00001 64 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 64 IPR042160 -
Trme1344249g00001 64 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1344249g00001 Trme-Chr1344249 13 205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1344249g00001 1 64 Homeobox Transcription Factor Family AT3G61150 62.687 6.77e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1344249g00001 K09338 - vvi:100260889 109.383