Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1342346g00001 ATGGCTGAGGAGGAAATTCTGAAAATTCAAGCTCAAGAAAGTGTTACTTTGACCCTTGTGAAGGAGATTACTGAATATTTTCATGGGAACTTAGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCTTAGTTGTAAGAGATTTTCTAGCCGTTCTTGACAGG 162 0.3827 MAEEEILKIQAQESVTLTLVKEITEYFHGNLAKEEAHPFRIFLVVRDFLAVLDR 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1342346g00001 54 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 53 - -
Trme1342346g00001 54 Gene3D Formin, FH2 domain 1 54 IPR042201 -
Trme1342346g00001 54 PANTHER FORMIN-RELATED 1 54 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1342346g00001 Trme-Chr1342346 21 182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1342346g00001 2 54 FH2 protein (formin) Gene Family AT3G25500 84.906 3.34e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1342346g00001 - - ahf:112744322 101.679