Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134228g00001 ATGGCTAAATCTTCTAGAAAACAAGGTAATTTGCAAATTTCAACTGCCTTCACTACCAAGAAAGATTATGGTAAAGAAGAGAGGGAAGCTCAATGGGCTCATGNTCAAAGGACACTTCATGGACTTCAACCACCAGAAAGTTCTGGAATCTTCAATGAGAAGAGCAGTTATAGAGAATTGTCTGAGATTGCTGAGCAGGCTAAGAGACGTGCCGAAGTTGCTAG 224 0.4107 MAKSSRKQGNLQISTAFTTKKDYGKEEREAQWAHXQRTLHGLQPPESSGIFNEKSSYRELSEIAEQAKRRAEVA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134228g00001 74 Coils Coil 57 74 - -
Trme134228g00001 74 Gene3D - 55 74 - -
Trme134228g00001 74 MobiDBLite consensus disorder prediction 20 34 - -
Trme134228g00001 74 MobiDBLite consensus disorder prediction 1 57 - -
Trme134228g00001 74 MobiDBLite consensus disorder prediction 41 55 - -
Trme134228g00001 74 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134228g00001 Trme-Chr134228 252 558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134228g00001 11 73 Primary Pumps ATPases AT2G24520 80.952 5.27e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134228g00001 K01535 - gmx:100816905 120.553