Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134153g00001 ATGGAAACTATGTCAAAAAAACCTTCTCAGAACCTCAAGGCATGTGGTTTATTTCACTTTTACTTATATGTGATCAACCTTGCGAAGGATGAGTTCGAGAGCAATTTCATTTCATCTGTTGTAGCTCCTGGTGAAATAGGTGTACAGTTTGATGACATAGGTGCTCTTGAAGATGTTAAGAAGGCACTTCAGGAACTTGTTATTCTTCCAATGAGAAGGCCTGAGCTTTTCTCTCATGGAAACCTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACCCTTCTGGCCAAGGCACTTGCGACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACGTCAAAG 375 0.4293 METMSKKPSQNLKACGLFHFYLYVINLAKDEFESNFISSVVAPGEIGVQFDDIGALEDVKKALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134153g00001 125 Pfam ATPase family associated with various cellular activities (AAA) 89 125 IPR003959 GO:0005524|GO:0016887
Trme134153g00001 125 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 26 125 - -
Trme134153g00001 125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 125 IPR027417 -
Trme134153g00001 125 Gene3D - 47 125 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134153g00001 Trme-Chr134153 13 539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134153g00001 48 125 Calmodulin-binding Proteins AT3G56690 43.590 7.25e-15 67.8