Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134089g00001 GGACCCAATAGTAGACTTATTATCACAACGAGAGACAGACATATACTTGGTGGAAAAGTTGACAAGATATATGAGGTCACACCATGGAATCTTAAAGACTCTTTAAAGCTCTTTAGCTTAAGAGCCTTCAAGCAAGACCATCCTTTAGAGGGTTACGAGCGTGTCTCAGAAAGGGCAGTTGAATGTGCAGAAGGTGTTCCATTAGCTTTAGAAGTTTTGGGTTCACATTTTCATTCCAGAAAACCAAAATTCTGGGAATCTGAGTTGAATTTGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGTAGAAATCCTAGAAGATAAAGCTCTTATATCCATTTCAAACAGCAATAGGATACTGATGCACGGCTTACTACAAAAAATGGCCTTTGATATAGTTCGACAAGAACATAATAAAGAACCAGGAAAGCGCAGCCGACTGAGGGATGCTAAAGACATTTGTGATGTACTTGGAAATAACAAGGTGTATATGGAGTGTTAA 504 0.3611 GPNSRLIITTRDRHILGGKVDKIYEVTPWNLKDSLKLFSLRAFKQDHPLEGYERVSERAVECAEGVPLALEVLGSHFHSRKPKFWESELNLXXXXXXXXXXXVEILEDKALISISNSNRILMHGLLQKMAFDIVRQEHNKEPGKRSRLRDAKDICDVLGNNKVYMEC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134089g00001 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 92 IPR027417 -
Trme134089g00001 167 Pfam NB-ARC domain 4 80 IPR002182 GO:0043531
Trme134089g00001 167 Gene3D - 30 98 IPR042197 -
Trme134089g00001 167 Coils Coil 89 91 - -
Trme134089g00001 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 158 IPR044974 GO:0006952
Trme134089g00001 167 Coils Coil 103 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134089g00001 Trme-Chr134089 1 504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134089g00001 1 81 WRKY Transcription Factor Family AT5G45050 37.805 1.18e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134089g00001 - - psat:127076353 231.876