Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133947g00001 ATGTCTTCAGTTGACTTCAATAGTGTAACAAATTCTCACTATGAGTTTCTAGGATCTTTCTTGGGAAGTTCTGATACAGCAAAAGAGTCAATTTTTTACTCATACACAAGACATATAAATGGTTTTGCTGCAAATTTGGAAGAAGAAGTAGCAGCTGAGATAGCAAGACATCCAAAAGTGTTGTCAGTGTTTGAGAACAATGGAAGGAAATTACACACAACTCGTTCATGGGGATTCATGGG 242 0.3678 MSSVDFNSVTNSHYEFLGSFLGSSDTAKESIFYSYTRHINGFAANLEEEVAAEIARHPKVLSVFENNGRKLHTTRSWGFMG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133947g00001 81 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 72 IPR037045 -
Trme133947g00001 81 Pfam Peptidase inhibitor I9 5 72 IPR010259 -
Trme133947g00001 81 FunFam Subtilisin-like protease SBT5.3 1 72 - -
Trme133947g00001 81 PANTHER PROTEINASE INHIBITOR, PROPEPTIDE 11 74 - -
Trme133947g00001 81 SUPERFAMILY Protease propeptides/inhibitors 24 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133947g00001 Trme-Chr133947 33 490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133947g00001 1 80 Subtilisin-like Serine Gene Family AT5G59810 65.000 3.17e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133947g00001 - - gmx:100794807 144.821