Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133929g00001 GTTGAAGATGGTGTTGAAGGAGAAATTTGGGTTTCATCACCAAGTAATGCTTCTGGTTATCTTGGTCACCCTTCTTTAACAAGAGAAGTTTTTCATGCAAGAATCAGAGACAAAGTTCGTAGGTGTTTTCTTCGAACCGGTGACAAAGGAATAGTGAAAGGAGAAAAAAGGTATCTCTTTGTTACTGGTAGAATTCAAGACACTATAAAGCTTCAAAATGGTGAAAAAATTCATCCACATTACATAGAAACCGCGGTTTTCAACAGTTTTCCGAAGTTACTACGAGGTGGTTGTGTTGCGGCTTTTAAAGTTTTAGCAACGGTTGTAATTGTTGCAGAGATGCAGAGGATTGAAAAAGATGTGGATGAGGAGATTCTAAGGAGTATTTGTGAGGGAATTAAAGAAAGTGTTATGAAAAAAGAGGGTGTTGAAGTTGGATGGATTGTTTTGGTTAAGAGTGAATGTGTTCCAAAAACTACTTCTGGGAAATTGCAAAGATGGGCTGCTAAAGAGAAGCTTCTAGATGGAAAAATGAAAATTTTGATGGAGATGAG 554 0.3736 VEDGVEGEIWVSSPSNASGYLGHPSLTREVFHARIRDKVRRCFLRTGDKGIVKGEKRYLFVTGRIQDTIKLQNGEKIHPHYIETAVFNSFPKLLRGGCVAAFKVLATVVIVAEMQRIEKDVDEEILRSICEGIKESVMKKEGVEVGWIVLVKSECVPKTTSGKLQRWAAKEKLLDGKMKILMEM 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133929g00001 184 Gene3D - 1 65 IPR042099 -
Trme133929g00001 184 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 2 183 - -
Trme133929g00001 184 Gene3D - 67 182 IPR045851 -
Trme133929g00001 184 Pfam AMP-binding enzyme 1 72 IPR000873 -
Trme133929g00001 184 SUPERFAMILY Acetyl-CoA synthetase-like 1 176 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133929g00001 4 175 Monolignol Biosynthesis Gene Families AT4G19010 30.058 2.00e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133929g00001 - - gmx:102666455 293.893