Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133864g00001 ATGTTTTTCGGGTTTGTTCAGGGGATTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATCTTAGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCGGCGGCTCTCCTGTCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGTGTCTTAGGTGGATCTCTGATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTTCTCATCATGTCTCTAAATGGGAATCACTTCGCAAGACTTCGTTTCCTAGAATTAATATTTTCTCGGGCTCCTCAAAGCCTTC 344 0.4331 MFFGFVQGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVISHHVSKWESLRKTSFPRINIFSGSSKPS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133864g00001 115 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 79 - -
Trme133864g00001 115 PANTHER WAT1-RELATED PROTEIN 7 80 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133864g00001 Trme-Chr133864 1 490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133864g00001 8 81 Nodulin-like Gene Family AT5G45370 75.676 2.57e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133864g00001 - - gmx:100809051 164.081