Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133616g00001 GCTGTGGCAACAGAATGGACTTTGGCGGAGCTTATCAATAATCCGAGGGTGTTGAAGAAAGCTAGGGAGGAGGTAGAATCAGTTGTGGGAAAAGATAGACTCGTTGACGAATCAGATATTCAGAATCTTCCTTACATTAGAGCCATGGTGAAAGAGGTATTCCGCTTGCACCCACCACTACCTGTGGTTAAGAGAAAATGTACCGAAGAGTGTGAGATCAACGGGTATGTGATTCCAGAGGGAGCATTGATACTTTTCAATGTATGGCAAGTTGGAAGAGACCCAAAGTATTGGGAGAAGCCATTGGAATTTCGTCCTGAGAGGTTCTTAGAAAATGCTGGTGAAGGCGAAGGTGAAGCGTCTTCAATTGATCTTAGGGGTCAACATTTCACACTTCTACCATTTGGGTCTGGAAGAAGAATGTGTCCTGGAGTCAATTTGGCTACGGCCGGAATGGCCACACTACTTTCATCTATTATCCAGTGCTTTGATCTACAAGTACCTGGTCCTAATGGACAACTATTGAAAGGTAGTGATGCTAAGGTTAGCATGGATGAGAGACCTGGTCTCTCTGTTCCAAGAGCACAA 588 0.4473 AVATEWTLAELINNPRVLKKAREEVESVVGKDRLVDESDIQNLPYIRAMVKEVFRLHPPLPVVKRKCTEECEINGYVIPEGALILFNVWQVGRDPKYWEKPLEFRPERFLENAGEGEGEASSIDLRGQHFTLLPFGSGRRMCPGVNLATAGMATLLSSIIQCFDLQVPGPNGQLLKGSDAKVSMDERPGLSVPRAQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133616g00001 196 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 135 144 IPR017972 GO:0005506|GO:0016705
Trme133616g00001 196 PRINTS P450 superfamily signature 13 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS P450 superfamily signature 48 59 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS P450 superfamily signature 133 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS P450 superfamily signature 142 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 SUPERFAMILY Cytochrome P450 2 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 Gene3D Cytochrome P450 1 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS E-class P450 group I signature 87 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS E-class P450 group I signature 47 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS E-class P450 group I signature 4 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS E-class P450 group I signature 142 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PRINTS E-class P450 group I signature 132 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 PANTHER STEROID 21-HYDROXYLASE-RELATED 1 195 - -
Trme133616g00001 196 Pfam Cytochrome P450 2 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme133616g00001 196 MobiDBLite consensus disorder prediction 174 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133616g00001 Trme-Chr133616 1 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133616g00001 1 195 Cytochrome P450 AT5G07990 44.388 2.37e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133616g00001 - - gmx:100037450 331.643