Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme1335576g00001 | ATGGAAGCTTCAAGGCTTAACAGGGTTTCTCCATGGGAGATTGAGCCCTCTGGCTCAGCTTCCACCACCAATACCTTGATGGCAGCTAGTTTGAAGAGGACCAAGATTGGATCGCCTTTAACAAAGCTAGAATTTCCAGTTCCCA | 145 | 0.4759 | MEASRLNRVSPWEIEPSGSASTTNTLMAASLKRTKIGSPLTKLEFPVP | 48 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme1335576g00001 | 48 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme1335576g00001 | Trme-Chr1335576 | 26 | 170 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme1335576g00001 | 8 | 47 | B3 DNA Binding Superfamily | AT2G33860 | 50.000 | 1.75e-07 | 43.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme1335576g00001 | K14486 | - | lja:Lj0g3v0345929.1 | 78.5666 |