Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133475g00001 GATAAGAATAAAGATTATGTTGTAGCAGAACATCAAGCTCTTTTATGTGCTTCAAAGTGCACATTTGTTGCTAATCTTTTCCCTCCTTTACCTGAGGAAACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAGCACCACAGAACCGCATTACATAAGATGTGTGAAACCAAATACTGTTTTGCAGCCAGGAATATTCGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATAAGTTGTGCTGGATATCCAACTAAAAGAACATTTGAAGAGTTCCTTGATCGATTTGGAATGCTAGCCCCTGATGTCCTTGACGGGTATATATTA 393 0.3868 DKNKDYVVAEHQALLCASKCTFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLSTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGYIL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133475g00001 131 ProSiteProfiles Myosin motor domain profile. 1 131 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme133475g00001 131 Pfam Myosin head (motor domain) 1 125 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme133475g00001 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 126 IPR027417 -
Trme133475g00001 131 PANTHER MYOSIN 1 124 - -
Trme133475g00001 131 Gene3D Kinesin motor domain 32 104 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133475g00001 Trme-Chr133475 1 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133475g00001 1 128 Myosins gene family AT2G31900 86.719 4.93e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133475g00001 K10357 - gmx:100817933 259.225