Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133455g00001 GCTAAGAGGTTAATTGGTAGGAAGTTCAGTGATGATGTTGTTCAAAAAGATATCAACTTATGGCCATTCAAAGTCATTGCCGGTACAAACAACAAACCCTTGGTTTCTGTTCAGTACAGGGGTCAGAAGAAGCACCTATGTGCAGAGGAAATTTCTTCAATGGTTCTAACAAAAATGCGGGAAATTGCAGAGGCATATTTGGAATCACCAGTTAAGAATGCAGTCATTACTGTGCCAGCTTATTTCAATGATTTTCAACGAAAAGCCACCATAGATGCCGGTGCTATTGCTGGCCTTGATGTTATGAGGATAATGTGTGAGCCTACTGCAGCAGCTGTTGCATATAGTCTTGACAAGAGAAC 362 0.4116 AKRLIGRKFSDDVVQKDINLWPFKVIAGTNNKPLVSVQYRGQKKHLCAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDFQRKATIDAGAIAGLDVMRIMCEPTAAAVAYSLDKRT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133455g00001 121 Gene3D - 1 121 - -
Trme133455g00001 121 FunFam heat shock 70 kDa protein-like 1 54 - -
Trme133455g00001 121 FunFam Endoplasmic reticulum chaperone BiP 7 121 - -
Trme133455g00001 121 PANTHER HEAT SHOCK PROTEIN 70KDA 1 118 IPR013126 GO:0005524|GO:0140662
Trme133455g00001 121 Pfam Hsp70 protein 1 120 IPR013126 GO:0005524|GO:0140662
Trme133455g00001 121 SUPERFAMILY Actin-like ATPase domain 1 119 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133455g00001 Trme-Chr133455 227 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133455g00001 1 120 Calmodulin-binding Proteins AT5G02500 69.167 5.81e-55 177