Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133406g00001 ATGAAGCAGAATATGAGAAAGAGGGTTTTGCAGAAGCTACACACAGCTTTTGGTGGTTCAGATGAAGACAATTACGCTTTTGGCCTTGACCGTGTAACCGACACAGAGATGTTCTTTTTAGCTTCTATGTACTTTTCTTTTCCAAAAGGGTATGGTGGACCCGGTAAGTGTTTTGCTTCTGCTAAACATTTCTGGTTCAAATCTGTTTCTGATTACTGCGTTCGTTCTTTCTTGGCTAAATCTGCTGGAATTCAAACTGTTGTTTTAGTACCTACTGATTTTGGTGTTCTTGAGTTGGGTTCTGTTAGAATGTTACCTGAAAACTTTGAATTGTTAAACAC 341 0.3871 MKQNMRKRVLQKLHTAFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPKGYGGPGKCFASAKHFWFKSVSDYCVRSFLAKSAGIQTVVLVPTDFGVLELGSVRMLPENFELLNT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133406g00001 114 PANTHER MYC 8 113 IPR045084 GO:0003700|GO:0006355
Trme133406g00001 114 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 3 113 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133406g00001 Trme-Chr133406 1 341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133406g00001 3 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 76.364 1.31e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133406g00001 - - vvo:131610753 206.838