Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133149g00001 ATGGATGCTACTTCTTTGGATTCAAATAGCAACATCCAAACTGAACAACATCCTTTGCTGATGGAGCAGCCAGAAAGCTGTAATGGACTTCACCACATAATTGATGTTACAAGGAATGATGAAACTTTGTCTACATCATCTCATAATGATCAACACTCGGAAACGCATTTACCGGTGATTGATAATCAACCAGCTGCGGGTACAGATGACTCCACTCATCAAANNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNATCCATTGAACTCTGGACTGTGGATTTCTGTTGAGCTTGTTGTCACTGTGACTCAAATCATAGCATCTATTGTGGTTTTGTTGTTGTCAAGAAACGAAAATCCCCAAGCCCCACTGTTTGTGTGGGTTGTAGGTTATGCATCTGGGTGTATTGCCACACTTCCTATTCTTTATTGGCGTTTTCAAAACCGTAATCAAAGAACTGAACAACAT 519 0.3391 MDATSLDSNSNIQTEQHPLLMEQPESCNGLHHIIDVTRNDETLSTSSHNDQHSETHLPVIDNQPAAGTDDSTHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLNSGLWISVELVVTVTQIIASIVVLLLSRNENPQAPLFVWVVGYASGCIATLPILYWRFQNRNQRTEQH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133149g00001 173 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 172 - -
Trme133149g00001 173 MobiDBLite consensus disorder prediction 1 21 - -
Trme133149g00001 173 MobiDBLite consensus disorder prediction 1 23 - -
Trme133149g00001 173 MobiDBLite consensus disorder prediction 38 78 - -
Trme133149g00001 173 MobiDBLite consensus disorder prediction 39 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133149g00001 Trme-Chr133149 1 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133149g00001 1 172 C3H Transcription Factor Family AT1G80400 36.410 1.68e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133149g00001 - - gmx:100819729 215.698