Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133128g00001 AGCATCAACCCCGACGAGGCTGTTGCATATGGAGCTGCTGTTCAAGCAGCTATCTTGAGCGGCGAAGGTAACGAGAAGGTTCAAGATTTGCTGCTTTTGGATGTCACCCCATTGTCACTTGGTTTGGAAACTGCCGGTGGTGTCATGACTGTTCTCATTCCAAGGAACACAACAATTCCAACCAAGAAGGAACAAGTTTTCTCTACCTACTCAGACAACCAACCTGGTGTCTTGATCCAAGTATATGAAGGTGAGAGAGCAAGAACTAGAGACAACAACTTGTTGGGTAAATTCGAGCTTTCCGGCATTCCTCCAGCTCCCCGTGGAGTTCCTCAAATCACTGTCTGTTTCGACATTGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNGGGCAGAAGAACAAGATCACCATTACAAACGACAAAGGTAGACTCTCAAAGGAAGAAATCGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCCGAAGACGAGGAGCACAAGAAGAAGGTCGATGCAAAGAATGCCTTGGAAAACTATGCCTACAACATGAGGAACACAATTAAAGATGAGAAG 588 0.4235 SINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIXXXXXXXXXXXXXXXGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133128g00001 196 FunFam Heat shock 70 kDa 24 178 - -
Trme133128g00001 196 PANTHER HEAT SHOCK PROTEIN 70KDA 1 193 IPR013126 GO:0005524|GO:0140662
Trme133128g00001 196 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 25 182 IPR029047 -
Trme133128g00001 196 Pfam Hsp70 protein 1 195 IPR013126 GO:0005524|GO:0140662
Trme133128g00001 196 Coils Coil 147 174 - -
Trme133128g00001 196 PRINTS 70kDa heat shock protein signature 110 126 - -
Trme133128g00001 196 PRINTS 70kDa heat shock protein signature 29 48 - -
Trme133128g00001 196 PRINTS 70kDa heat shock protein signature 2 22 - -
Trme133128g00001 196 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 15 196 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme133128g00001 Trme-Chr133128 2 589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133128g00001 1 196 Calmodulin-binding Proteins AT3G12580 90.816 1.08e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133128g00001 K03283 - gmx:100789474 327.405