Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13302g00001 AAGAATAAGAAGAAGAGTGGGAGGACAAAAGAAGAGGAGGACGATTTAGATAAGATTCTTGCAGAGCTTGGTGAAGCCCCTCCTACGGCAAAACCTGCTGCTCCTCCGCAGCAGGATGATAAAGTTCAGCCTGCTCCTGAAGTTGGTTCTGCTGCTGGTGCTTCAGTGGAAAAGGAGGGAGAAGAGGAGACTGTAGAATCAGCTGCTGCAAAAAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCCGGAAGTGCACCGGTGATTGAAACTGTAGAAGAGAAAGCTGAGATAAGTGAACCAAAGAAAAATGATTCGAAGACCAACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGARCTATTGGCTCGAAGACAAGAGGCTGAAGAGAGAAAGAAAAAAGAAGAGGAAGAGAAGCTAAGGAAAGAAGAAGAGGAGCGACAAARGCAAGAAGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTATAAAGAAGGAAAAAGAAAAGGAAAGAATCGCGAGAAAGAAGCTAGAAGGTAAATTTTTCACTGGTAAGCAGAAACAAGAACAACAACGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGGGTTGTGACTCTTCCTTCTGGAGACACTGGTGCACCAGCCAAAAAACCCATTTATCAGACAAAGAAGGGGAAATCAACCAATCGAAATCATAATGGTGCCGCTGCTGTCAAGATAGATGAAAACGTTGAAGTAAAGGAAACTACCGCTGATTTAGATTCAAAGGAACTGGAAAAGGTTGAAGAAGTGGAGTCGGTGCAGATGGAGGACAAAGTTGAACTTCCTGAAGCTGTTGAAGAGGATGCAGTGGAAGAAGATGATGATGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATAAAAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACGGATTGTCAAAAAAGAGATTAAAAATGTACCTGCTAAAAATGCTGGTGAGATTTGCATTTTATTGGTAGTTTTTACTTCTTCAGACAGGATTGTGCTTGAAATTTGTATAATTGTTGAAAACAACATGCTTTATACCATAGCAATCTTGGGTCCTATTATCTGTTGA 1155 0.4225 KNKKKSGRTKEEEDDLDKILAELGEAPPTAKPAAPPQQDDKVQPAPEVGSAAGASVEKEGEEETVESAAAKKKKKKKEKEKEKKAAAAAGSAPVIETVEEKAEISEPKKNDSKTNKKVPKHVREMQELLARRQEAEERKKKEEEEKLRKEEEERQXQEELERQAEEAKRIKKEKEKERIARKKLEGKFFTGKQKQEQQRLEAMRRQILNSTGVVTLPSGDTGAPAKKPIYQTKKGKSTNRNHNGAAAVKIDENVEVKETTADLDSKELEKVEEVESVQMEDKVELPEAVEEDAVEEDDDEDEWDAKSWDDVNLNKRGAFADEEVDSEPERIVKKEIKNVPAKNAGEICILLVVFTSSDRIVLEICIIVENNMLYTIAILGPIIC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13302g00001 384 MobiDBLite consensus disorder prediction 283 307 - -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 1 21 - -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 1 170 - -
Trme13302g00001 384 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 30 300 IPR015760 -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 56 73 - -
Trme13302g00001 384 Coils Coil 118 155 - -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 285 306 - -
Trme13302g00001 384 Coils Coil 157 187 - -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 99 170 - -
Trme13302g00001 384 MobiDBLite consensus disorder prediction 211 246 - -
Trme13302g00001 384 Coils Coil 58 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13302g00001 Trme-Chr13302 1 1155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13302g00001 7 342 Eukaryotic Initiation Factors Gene Family AT1G76810 48.034 8.21e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13302g00001 K03243 - gmx:100814875 326.25