Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme133025g00001 AAATGGAATGAAATTGTAGTTGAGGCTGCTGATTCTGATTTCGTGTATACCAAAGAAAATGAATCAACACCAATAAATGAAATGGCTGCTGTAAAATCTGTGGACCCTGGTAGTAAGAATCGACAATGTATAGCTTTTATTGAAACCAAGGGAAGACAGTGCGTGAGATGGGCAAATGAGGGAGATGTTTACTGTTGTGTGCATTTATCCTCTCGTTTTTTGGCTGGCTCAGCAAATGCCGAAAGTCCGGGTCAAAGTGATACTCCTATGTGTGATGGTACAACTGTTGTGGGTACTAAATGCAAGCATCGGGCTCTACCTGGATCGTTATACTGTAAGAAACACCGGCCTTATGCTGAAACCGAACAGAACTCAAGTTTAGCCCAAAATGCTATGAAGAGGAAGCATGAAGAAAATTATACTGGTTCAGAGAACATGATCTGCAAAGACATGGTATTGGTAAATGCTGAAGCTGCACTGCAAATGGTTCCAGTGTCATCCATTGCTGGTGATACATTACATGGAGAAAACAACTTGTCTGCGAAGCCAATGCATTCTGAAAAGGGTCATGTTGTAATGGAGGCACC 587 0.4191 KWNEIVVEAADSDFVYTKENESTPINEMAAVKSVDPGSKNRQCIAFIETKGRQCVRWANEGDVYCCVHLSSRFLAGSANAESPGQSDTPMCDGTTVVGTKCKHRALPGSLYCKKHRPYAETEQNSSLAQNAMKRKHEENYTGSENMICKDMVLVNAEAALQMVPVSSIAGDTLHGENNLSAKPMHSEKGHVVMEAP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme133025g00001 196 Pfam CCCH zinc finger in TRM13 protein 41 69 IPR021721 GO:0008168
Trme133025g00001 196 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 190 - -
Trme133025g00001 196 MobiDBLite consensus disorder prediction 174 196 - -
Trme133025g00001 196 MobiDBLite consensus disorder prediction 181 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme133025g00001 2 152 C2H2 Transcription Factor Family AT2G23740 51.592 4.10e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme133025g00001 - - gmx:100776704 298.901