Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13297g00001 AAGAATAAGAAGAAGAGTGGGAGGACAAAAGAAGAGGAGGACGATTTAGATAAGATTCTTGCAGAGCTTGGTGAAGCCCCTCCTACGGCAAAACCTGCTGCTCCTCCGCAGCAGGATGATAAAGTTCAGCCTGCTCCTGAAGTTGGTTCTGCTGCTGGTGCTTCAGTGGAAAAGGAGGGAGAAGAGGAGACTGTAGAATCAGCTGCTGCAAAAAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCCGGAAGTGCACCGGTGATTGAAACTGTAGAAGAGAAAGCTGAGATAAGTGAACCAAAGAAAAATGATTCGAAGACCAACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGARCTATTGGCTCGAAGACAAGAGGCTGAAGAGAGAAAGAAAAAAGAAGAGGAAGAGAAGCTAAGGAAAGAAGAAGAGGAGCGACAAAGGCAAGAAGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTATAAAGAAGGAAAAAGAAAGGGAAAACAAAGCGAGAAAGAAGCTAGAAGGTAAATGGATGACTGGTAAGCAGAAACAAGAAGCTCAACGTTTGGAGGCAATGAGGAAGCAGATTCTCAATAGCACAGGGGGTGTGACTCTTCCTTCTGTAGACACTGGTGCACCAGCCAAAAAACCCATTTATCAGACAAAGAAGGGGAAATCAACCAATCGAAATCATAATGGTGCCGCTGCTGTCAAGATAGATGAAAACGTTGAAGTAAAGGAAACTACCGCTGATTTAGATTCAAAGGAACTGGAAAAGGTTGAAGAAGTGGAGTCGGTGCAGATGGAGGACAAAGTTGAACTTCCTGAAGCTGTTGAAGAGGATGCAGTGGAAGAAGATGATGATGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATAAAAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACGGATTGTCAAAAAAGAGATTAAAAATGTACCTGCTAAAAATGCTGGTGAGATTTGCATTTTATTGGTAGTTTTTACTTCTTCAGACAGGATTGTGCTTGAAATTTGTATAATTGTTGAAAACAACATGCTTTATACCATAGCAATCTTGGGTCCTATTATCTGTTGA 1155 0.4251 KNKKKSGRTKEEEDDLDKILAELGEAPPTAKPAAPPQQDDKVQPAPEVGSAAGASVEKEGEEETVESAAAKKKKKKKEKEKEKKAAAAAGSAPVIETVEEKAEISEPKKNDSKTNKKVPKHVREMQELLARRQEAEERKKKEEEEKLRKEEEERQRQEELERQAEEAKRIKKEKERENKARKKLEGKWMTGKQKQEAQRLEAMRKQILNSTGGVTLPSVDTGAPAKKPIYQTKKGKSTNRNHNGAAAVKIDENVEVKETTADLDSKELEKVEEVESVQMEDKVELPEAVEEDAVEEDDDEDEWDAKSWDDVNLNKRGAFADEEVDSEPERIVKKEIKNVPAKNAGEICILLVVFTSSDRIVLEICIIVENNMLYTIAILGPIIC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13297g00001 384 MobiDBLite consensus disorder prediction 1 21 - -
Trme13297g00001 384 MobiDBLite consensus disorder prediction 1 245 - -
Trme13297g00001 384 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 30 300 IPR015760 -
Trme13297g00001 384 MobiDBLite consensus disorder prediction 285 307 - -
Trme13297g00001 384 MobiDBLite consensus disorder prediction 56 73 - -
Trme13297g00001 384 Coils Coil 118 187 - -
Trme13297g00001 384 MobiDBLite consensus disorder prediction 285 306 - -
Trme13297g00001 384 Coils Coil 58 89 - -
Trme13297g00001 384 MobiDBLite consensus disorder prediction 99 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13297g00001 Trme-Chr13297 1 1155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13297g00001 7 342 Eukaryotic Initiation Factors Gene Family AT1G76810 48.596 1.58e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13297g00001 K03243 - gmx:100814875 325.865