Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1328g00001 GGGAACATAACGAATGAAACTAATGTAATGACTTCCAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGTACATATTATGCTGCTGTTATGGAGAATCGCACTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGCGCCGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTATATGCAATAGAAGCATCTGAAATGGCAGAATACGCACGTAAACTTATAGCTGGGAACCCGCTACTGGGTCAACGAATTACCGTTATCAAAGGAAGAGTTGAGGATGTTGTATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTTATTGCCAGAGATAGATTTCTTACCCCTAATGGCAAAATGTTTCCTACATCGGGAAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAGTAAGGGGCTGTTCTGGCAGCAACAAAACTATTATGGTGTTGATTTGACACCCTTGCACGGGACTGCCTTTCAAGGATACTTCTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGGTTGTTAATATCTCCTCCTATGTTCCATGCGATGGACTTTACCAAAATAAAGGTCTCATTGGTTTGA 747 0.4016 GNITNETNVMTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMAEYARKLIAGNPLLGQRITVIKGRVEDVVLPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTSGRIHMAPFSDEYLFVEIASKGLFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLISPPMFHAMDFTKIKVSLV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1328g00001 248 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 8 245 IPR025799 GO:0016274|GO:0018216
Trme1328g00001 248 Pfam Ribosomal protein L11 methyltransferase (PrmA) 64 137 - -
Trme1328g00001 248 FunFam Probable histone-arginine methyltransferase CARM1 8 168 - -
Trme1328g00001 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 234 IPR029063 -
Trme1328g00001 248 CDD AdoMet_MTases 67 167 - -
Trme1328g00001 248 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 21 248 IPR025799 GO:0016274|GO:0018216
Trme1328g00001 248 Gene3D - 170 248 - -
Trme1328g00001 248 Gene3D Vaccinia Virus protein VP39 6 168 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1328g00001 Trme-Chr1328 135 3057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1328g00001 28 244 C2H2 Transcription Factor Family AT3G12270 35.371 9.53e-33 123