Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme132698g00001 ATGAGCTATGGATCTATAGCAGCAGATACTCTTACAAGTTTAAAGATGCATACTCGCGGTTGGAGATCAGTATACTGCATGCCAAAGAGGGCTGCTTTTCGAGGAACAGCACCAATCAATCTTACAGAAAGACTTAACCAAGTACTTAGATGGGCTGTAGGATCACTTGAAATCCTATTCAGCCGCCACTGCCCATTATGGTATGGTTTTAAGGAAGGAAGACTCAAGGTTCTTCAAAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTACCTCTCACAATCTATTGTATCATTCCTGCCATCTGCTTGCTCACTGATAAATTCATCACACCATCGGTAATCCATTTCCTTATATTTATTTATTGA 378 0.4021 MSYGSIAADTLTSLKMHTRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPLWYGFKEGRLKVLQRIAYINSTVYPFSALPLTIYCIIPAICLLTDKFITPSVIHFLIFIY 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme132698g00001 125 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 124 - -
Trme132698g00001 125 Pfam Cellulose synthase 3 121 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme132698g00001 Trme-Chr132698 9 386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme132698g00001 3 124 Cell Wall Biosynthesis AT5G17420 68.548 4.39e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme132698g00001 K10999 - gmx:100807219 206.453