Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1326616g00001 TCTTGGAACCACACTGAAGAGAACAAAAGGAGGACACTTCAGAAGAATAATATTGCTGCAGCAATTGCAAAGACTGACATCTATGATTTCCTGGTTGACATTGTTCCCCGTGATGACCTGAAAGATGAAGTGCTGGCATCAATCCCAAGGGGAACAATGCATGTTGGTGGGCCTGCTGATGCTCTTCCATACTGCTACATGCCA 204 0.4559 SWNHTEENKRRTLQKNNIAAAIAKTDIYDFLVDIVPRDDLKDEVLASIPRGTMHVGGPADALPYCYMP 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1326616g00001 68 SUPERFAMILY Histone-fold 1 37 IPR009072 GO:0046982
Trme1326616g00001 68 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 39 - -
Trme1326616g00001 68 Gene3D Histone, subunit A 1 37 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1326616g00001 Trme-Chr1326616 1 204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1326616g00001 1 68 CCAAT-HAP5 Transcription Factor Family AT1G08970 72.059 3.60e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1326616g00001 K08066 - qsu:111987198 133.265