Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13253g00001 ATGTCGTGGCAAACTTACGTTGATGAACATTTGATGTGTGATATTGATGGCACCGGACACCATCTCACTGCAGCTGCCATCATTGGCCATGATGGCTCTGTTTGGGCTCAGAGCTCTTCCTTCCCAGCGATTAAGCCTCAAGAGAACAGTGATATCATGAAAGATTTCGACGAACCGGGCCATCTTGCTCCTACAGGCTTGCACCTTGCTGGAGTCAAATACATGGTTATTCAAGGAGAGTCTGGAGCTGTCATTCGCGGGAAGAAGGGATCCGGAGGCATCACCATAAAGAAGACTGGTCAAGCTTTAGTTTTTGGTGTTTATGAAGAACCTGTAACTCCTGGACAATGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTCATTGATCAGG 394 0.4721 MSWQTYVDEHLMCDIDGTGHHLTAAAIIGHDGSVWAQSSSFPAIKPQENSDIMKDFDEPGHLAPTGLHLAGVKYMVIQGESGAVIRGKKGSGGITIKKTGQALVFGVYEEPVTPGQCNMVVERLGDYLIDQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13253g00001 131 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Profilin signature 115 131 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 119 131 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Trme13253g00001 131 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Trme13253g00001 131 CDD PROF 2 131 IPR005455 GO:0003779
Trme13253g00001 131 FunFam Profilin 1 131 - -
Trme13253g00001 131 SMART prof_2 1 131 IPR005455 GO:0003779
Trme13253g00001 131 Pfam Profilin 1 131 IPR005455 GO:0003779
Trme13253g00001 131 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Trme13253g00001 131 Gene3D Dynein light chain 2a, cytoplasmic 1 131 - -
Trme13253g00001 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Trme13253g00001 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13253g00001 Trme-Chr13253 431 1316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13253g00001 1 131 Cytoskeleton Gene Families AT4G29340 84.848 1.92e-82 236