Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme132313g00001 | GAGAAAATTGTGATCCCCAAAACATTGCCTTTCATAACACTCTTAGGGGATGCAAGGGATCGACCAACTATTACTGGAAACGATACCGCGTCTGTTACGGGAAGCGATGGGGCTTTGTTGAGGACATTCAATAGTGCGACTGTTGCTGTGAATGCTAGCTATTTTATAGCCATCAACATTAAATTTGAGGGGAAGTAA | 198 | 0.4293 | EKIVIPKTLPFITLLGDARDRPTITGNDTASVTGSDGALLRTFNSATVAVNASYFIAINIKFEGK | 65 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme132313g00001 | 65 | Gene3D | - | 1 | 65 | IPR012334 | - | |
| Trme132313g00001 | 65 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 1 | 63 | - | - | |
| Trme132313g00001 | 65 | Pfam | Pectinesterase | 1 | 63 | IPR000070 | GO:0030599|GO:0042545 | |
| Trme132313g00001 | 65 | SUPERFAMILY | Pectin lyase-like | 1 | 65 | IPR011050 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme132313g00001 | 1 | 62 | Carbohydrate Esterase | AT5G47500 | 48.387 | 8.57e-14 | 62.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme132313g00001 | K01051 | - | lja:Lj5g3v1573150.1 | 103.605 |