Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme132108g00001 CTAGACAAGACAGACTTGTTTGTTGCTAATAATCCAGTGGGAGTTGAAACTCGAGTACGTGATATGATTCAACTGCTAGAGGTCCAACAATCTAATGATGTTCTGCTACTCGGAATGTGGGGCATGGGTGGAATTGGCAAAACCACCATTGCAAAAGCCATCTATAATAAAATTGGCCGCAATTTTGAGGCTAGGAGTTTCCTAGCAAATACTAGGGAGGTTTGGGAGAAAAATGGCGGACAAGTGTCTTTACAACAAAAACTTGTCTTTGATATTTGCTTGGAATCGACAACCAAGATACAAAGCATTGAGGCAGGAAAAATTATGTTAAAGGATAGACTCTCTGGTAAAAGAGTACTTCTTGTACTTCATGATGTGAGTACATTGGATCAATTGAATGCTTTGTGTGGAAGTCGTCAATGGTTTGGTTCGGGGAGTAGAATAATTATCACAACTAGAGATATGCATCTACTTAGAGGGAATAGAGTCGACCAAGTATACACAATGGAAGAAATGGACAAAAAGTGA 528 0.3939 LDKTDLFVANNPVGVETRVRDMIQLLEVQQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEARSFLANTREVWEKNGGQVSLQQKLVFDICLESTTKIQSIEAGKIMLKDRLSGKRVLLVLHDVSTLDQLNALCGSRQWFGSGSRIIITTRDMHLLRGNRVDQVYTMEEMDKK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme132108g00001 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 174 IPR027417 -
Trme132108g00001 175 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 161 IPR044974 GO:0006952
Trme132108g00001 175 Pfam NB-ARC domain 16 157 IPR002182 GO:0043531
Trme132108g00001 175 Gene3D - 4 166 IPR027417 -
Trme132108g00001 175 PRINTS Disease resistance protein signature 36 51 - -
Trme132108g00001 175 PRINTS Disease resistance protein signature 113 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme132108g00001 Trme-Chr132108 2 529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme132108g00001 13 175 WRKY Transcription Factor Family AT5G45050 31.737 4.38e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme132108g00001 - - cam:101494533 291.582