Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme132102g00001 ATGAATCAAGAAGCTATGAATGCAACAGGGAACTCAACTCAACAAGTAAGGAACAAGGTTTCACCTATGATCGGTATCGACTTGGGGACGACACATTCTTGTGTCGTCGTCTGGAATTCCACCGGCAAGGTGGAAATCATTCCAGACGAACAGGGGAGGCGGATAGTTTCTTCATGCGTCGCATTTACAAGCACCRGAAAATTAATGATCGTAAACGAAGCCGATGATTGTGACATCAACAATGTTTTCG 250 0.444 MNQEAMNATGNSTQQVRNKVSPMIGIDLGTTHSCVVVWNSTGKVEIIPDEQGRRIVSSCVAFTSTXKLMIVNEADDCDINNVF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme132102g00001 83 Pfam Hsp70 protein 23 69 IPR013126 GO:0005524|GO:0140662
Trme132102g00001 83 SUPERFAMILY Actin-like ATPase domain 21 65 IPR043129 -
Trme132102g00001 83 FunFam heat shock 70 kDa protein-like 17 82 - -
Trme132102g00001 83 ProSitePatterns Heat shock hsp70 proteins family signature 1. 26 33 IPR018181 -
Trme132102g00001 83 Gene3D - 4 81 - -
Trme132102g00001 83 PRINTS 70kDa heat shock protein signature 51 63 - -
Trme132102g00001 83 PRINTS 70kDa heat shock protein signature 22 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme132102g00001 Trme-Chr132102 102 480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme132102g00001 22 69 Calmodulin-binding Proteins AT1G56410 56.250 1.60e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme132102g00001 K03283 K09490 psom:113320763 66.2402