Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme132090g00001 ATGGTTTGGTTGGTGGCTGCTTCTTTCCTTCTGAACAGGCATGAGGCATCCCTAGTGGAAAACATTGCTCAACACATACATAGAAAGTTGGTTCCTAAATTGCCATCTTGTACAGAGAACCTTGTTGGGATTTCTTCAAATGTGGAGGAAGTGCACAAGCTCGTAGGTATGCAGTTGAACGATGTTCGCTTTATAGGCATATGGGGTATGGGGGGCATAGGTAAGTCAACTATTGCTAGAGCTGTCTATGAAGCAATCCAAG 262 0.4427 MVWLVAASFLLNRHEASLVENIAQHIHRKLVPKLPSCTENLVGISSNVEEVHKLVGMQLNDVRFIGIWGMGGIGKSTIARAVYEAIQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme132090g00001 87 Gene3D - 17 87 IPR027417 -
Trme132090g00001 87 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 86 IPR044974 GO:0006952
Trme132090g00001 87 Pfam NB-ARC domain 50 85 IPR002182 GO:0043531
Trme132090g00001 87 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 85 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme132090g00001 Trme-Chr132090 84 345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme132090g00001 42 86 WRKY Transcription Factor Family AT5G45050 46.667 4.24e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme132090g00001 - - aprc:113861574 119.012