Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme132049g00001 GGAGGAGTGTTTCAACAGACACCTCCTGGGTTTAGAGCTTTGTCTAATGCTCATGGTGGTTCTGATGGTTCTGCATTTTCAGTAGAGGTTCAGCATGGTAGTTTTAGTCATGGTGGTGGTGTTAGCAATAACATAGGTTCATCTTCTGGTGCTGTACTGCCTTATTCAGGTGAGCAGCCTGTGAAAAAGAAAAGAGGGAGGCCTAGAAAGTATGGTCCTGATGTACCTGTTTCTTTGAGACTCTCTCCTATGTCTGCCACTGCTAATTCCACTCCTGATTCGGAGAAACGGCCGAGAGGGCGCCCTCCTGGAAGTGGAAGGAAGCAACAACTAGCTTCTCTAGGGAAAACTTGTGATTAG 360 0.4694 GGVFQQTPPGFRALSNAHGGSDGSAFSVEVQHGSFSHGGGVSNNIGSSSGAVLPYSGEQPVKKKRGRPRKYGPDVPVSLRLSPMSATANSTPDSEKRPRGRPPGSGRKQQLASLGKTCD 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme132049g00001 119 MobiDBLite consensus disorder prediction 1 119 - -
Trme132049g00001 119 PRINTS AT-hook-like domain signature 94 105 IPR017956 GO:0003677
Trme132049g00001 119 PRINTS AT-hook-like domain signature 62 72 IPR017956 GO:0003677
Trme132049g00001 119 MobiDBLite consensus disorder prediction 27 54 - -
Trme132049g00001 119 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 110 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme132049g00001 Trme-Chr132049 2 451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme132049g00001 10 119 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 42.424 1.67e-15 69.3