Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1320176g00001 ATGGTTGCGAGTGAGAATAACATGCTTGGTTTATTTGAACTCGAAATTCCTCTTGCGCCACGCTACCTTCCTATCCAAGTATGTTTTGCTGTAGATGCCGATGGAATATTAACCGTCTCTGCAGAGGAAGAAAC 134 0.4328 MVASENNMLGLFELEIPLAPRYLPIQVCFAVDADGILTVSAEEET 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1320176g00001 45 Coils Coil 39 45 - -
Trme1320176g00001 45 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 3 43 IPR029047 -
Trme1320176g00001 45 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 45 IPR029047 -
Trme1320176g00001 45 Pfam Hsp70 protein 2 44 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1320176g00001 Trme-Chr1320176 1 134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1320176g00001 5 45 Calmodulin-binding Proteins AT1G16030 62.791 7.68e-11 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1320176g00001 - - lja:Lj0g3v0151879.1 57.7658