Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme1319025g00001 | ATGTCTCTTTCTCATTCAGAACAAGTTAAGTTATTGTTGAGAGAAGGAGGGAAGGTTTTCTCTCGAGCCGAGCCAAGACACAAGCAAGAAATTGTGAGACTATTAAAGGAAATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAG | 168 | 0.4167 | MSLSHSEQVKLLLREGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALK | 56 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme1319025g00001 | 56 | SUPERFAMILY | HAD-like | 13 | 56 | IPR036412 | - | |
Trme1319025g00001 | 56 | Pfam | haloacid dehalogenase-like hydrolase | 18 | 56 | - | - | |
Trme1319025g00001 | 56 | PRINTS | H+-transporting ATPase (proton pump) signature | 17 | 33 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Trme1319025g00001 | 56 | PRINTS | H+-transporting ATPase (proton pump) signature | 45 | 56 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Trme1319025g00001 | 56 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 7 | 56 | - | - | |
Trme1319025g00001 | 56 | Gene3D | - | 3 | 56 | IPR023214 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme1319025g00001 | Trme-Chr1319025 | 1 | 168 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme1319025g00001 | 1 | 56 | Primary Pumps ATPases(2) | AT4G00900 | 80.357 | 7.28e-26 | 95.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme1319025g00001 | K01537 | - | gmx:100800498 | 106.686 |