Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131768g00001 ATGGAGATTGTTGGTAATTGTCTTACTGACTCTAAGATTGACAAGGATAGTATAGATGATGTTGTCCTTGGTGGTGGTTCTTCAAGGATTCCCAAAGTGCAGCAGCTATTGAGGGACTTTTTTAAGGGAAAGGATCTCTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTTTGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTTATGGTGTTAAGAATGTCCCAAACTTGGTGTTGATCGATGTTACACCACTCTCTTTAGGTTATGAGATAGAACATGATAAGATGTGTGTAGTGATTCCTAGGAATACAACTATACCTGCAAAGGAGACATCAGGATGTGCAACACCTGAAGATAACACTTCATCAGTCTTGATCAGGGTTTATGAGGGTGAGAGAACTAGAGCTAGTGACAACATTCTGCTTGGTTCTTTTAGTCTCTCTGGGATTCCCACTCCACCTCGTGGCCATCCTCTTAAT 480 0.4313 MEIVGNCLTDSKIDKDSIDDVVLGGGSSRIPKVQQLLRDFFKGKDLCKSINPDEAVAFGAAVQAALLSYGVKNVPNLVLIDVTPLSLGYEIEHDKMCVVIPRNTTIPAKETSGCATPEDNTSSVLIRVYEGERTRASDNILLGSFSLSGIPTPPRGHPLN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131768g00001 160 Pfam Hsp70 protein 2 158 IPR013126 GO:0005524|GO:0140662
Trme131768g00001 160 Gene3D - 51 65 - -
Trme131768g00001 160 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 73 158 IPR029047 -
Trme131768g00001 160 SUPERFAMILY Actin-like ATPase domain 2 67 IPR043129 -
Trme131768g00001 160 ProSitePatterns Heat shock hsp70 proteins family signature 3. 21 35 IPR018181 -
Trme131768g00001 160 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 68 159 IPR029047 -
Trme131768g00001 160 PRINTS 70kDa heat shock protein signature 50 70 - -
Trme131768g00001 160 PRINTS 70kDa heat shock protein signature 18 34 - -
Trme131768g00001 160 PRINTS 70kDa heat shock protein signature 76 95 - -
Trme131768g00001 160 PANTHER HEAT SHOCK PROTEIN 70KDA 1 158 IPR013126 GO:0005524|GO:0140662
Trme131768g00001 160 Gene3D - 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131768g00001 Trme-Chr131768 30 509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131768g00001 1 158 Calmodulin-binding Proteins AT3G12580 65.409 3.10e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131768g00001 K03283 - gmx:102667578 213.772