Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131754g00001 ATGGAAGATGATGAAGCGGGTGAAAATGATTCGGAAGAAGCAGTTATAGGGTTTTCGAGTGGTTTAGCTTGGCTAGTTATTATGACTGTGTTCATTGCGATTTTGTCTGAATATGTGGTTGACACAATTGAGGATGCATCAGATTCATGGGGTCTATCTGTCAGCTTCCTCAGCATAATCATGCTACCAATAGTTGGCAATGCAGCT 207 0.4155 MEDDEAGENDSEEAVIGFSSGLAWLVIMTVFIAILSEYVVDTIEDASDSWGLSVSFLSIIMLPIVGNAA 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131754g00001 69 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 69 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131754g00001 Trme-Chr131754 1 539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131754g00001 12 69 Antiporters AT3G51860 82.759 1.89e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131754g00001 K07300 - gmx:100797538 109.383