Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131753g00001 TATTCTAGGAACACCTACATAGGAGATGAAGGAACAAGAGGAATCTCCGGCGGAGAACGTCGCAGAGTCTCAATCGGGGTAGATATAATCCATGGACCTTCACTCCTTTTCCTAGACGAACCAACTTCAGGACTAGACTCAACAAGTGCTCTTAGTGTGATTGAAAAAGTACATGACATAGCAAGAAATGGTAGCACAGTTATTCTCACAATCCACCAACCTTCATCAAGAATTCAGCTTCTCCTTGACCATCTCATCATCCTTGCTAGAGGACAACTCATGTTTCAAGGATCATTTAAAGATGTAACTCTCCATTTGAACCGAATGGGACGAAAAGTACCTAAAGGAGAGAATCCAATTGAGAATCTCATTGATGTGATACAAGAGTATGATCAGTGTGATGTTGTTGGTGTTGAGGT 419 0.4153 YSRNTYIGDEGTRGISGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKVHDIARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSFKDVTLHLNRMGRKVPKGENPIENLIDVIQEYDQCDVVGVEV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131753g00001 140 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 130 - -
Trme131753g00001 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 121 IPR027417 -
Trme131753g00001 140 Pfam ABC-2 type transporter 72 128 IPR043926 GO:0140359
Trme131753g00001 140 Gene3D - 3 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131753g00001 Trme-Chr131753 169 587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131753g00001 5 98 Calmodulin-binding Proteins AT2G36910 34.737 8.54e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131753g00001 K05681 - qsa:O6P43_033300 244.202