Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131547g00001 ATGAAGAATGGAAGTTTGCAGGATATGTTGACCAAATTTGAAAGAGGTGAAGCGGAGTTGGATTGGTTGTCAAGGCATAAGATTGCGCTTGGTATCGCGGCTGGTCTTGAATACCTTCACATGAGCNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCAAACATTCTTCTTGATGATGATATGGAAGCTAGGATTGCCAGTTTTGAACTTGCAACAGCGATGCCTGATGGGCAGACGCATATCAGTACTACAAGCGTGGTTGGCACGGTGGGATATATCGCACCTGAGTGTCATCAGTTATTCACATTCAGTGACAAGTGTGACATTTATAGCTTTGGTGTTACGCTTGGTGTTTTGGTGATGGGAAAACTTCCTTCTGATGACTTTTTTCAGCACACGGACGAGATGAGTTCAGTCAGGTGGATGAGAAATATCATGACTTCAGAAAATCCAAAGGATGCAATTGATACAAGGCTTATAG 487 0.3984 MKNGSLQDMLTKFERGEAELDWLSRHKIALGIAAGLEYLHMSXXXXXXXXXXXXXNILLDDDMEARIASFELATAMPDGQTHISTTSVVGTVGYIAPECHQLFTFSDKCDIYSFGVTLGVLVMGKLPSDDFFQHTDEMSSVRWMRNIMTSENPKDAIDTRLI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131547g00001 162 SUPERFAMILY Protein kinase-like (PK-like) 1 149 IPR011009 -
Trme131547g00001 162 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
Trme131547g00001 162 Pfam Protein kinase domain 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme131547g00001 162 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 161 - -
Trme131547g00001 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131547g00001 Trme-Chr131547 27 513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131547g00001 1 162 Receptor kinase-like Gene Family AT2G31880 65.432 4.39e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Trme131547g00001 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131547g00001 - - gmx:100811980 234.572