Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131459g00001 ATGCATCCAATCAAAACAGCAGTGGAAAAAGAATGTCCAGACACAGTTTCTTGTGCTGATATTCTTGCCCTTTCTGCACAAATATCATCTATTCTGGCAGATGGTCCTAATTGGAAAGTTCCCTTAGGAAGAAGGGATGGTTTAACAGCTAACCAATCACTTGCTAATACAGCTCTTCCAGCTCCTTTCCACTCATTGGATATACTTAAATCTAAATTTAAAGATCAAGGCCTCGACACAACTGATCTAGTGGCTCTCTCAG 262 0.4046 MHPIKTAVEKECPDTVSCADILALSAQISSILADGPNWKVPLGRRDGLTANQSLANTALPAPFHSLDILKSKFKDQGLDTTDLVALS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131459g00001 87 Gene3D - 3 59 - -
Trme131459g00001 87 Pfam Peroxidase 2 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 Gene3D Peroxidase, domain 2 60 87 - -
Trme131459g00001 87 PRINTS Plant peroxidase signature 34 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PRINTS Plant peroxidase signature 81 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PRINTS Plant peroxidase signature 15 25 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PRINTS Haem peroxidase superfamily signature 16 33 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PRINTS Haem peroxidase superfamily signature 82 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PRINTS Haem peroxidase superfamily signature 34 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 SUPERFAMILY Heme-dependent peroxidases 2 87 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 PANTHER PEROXIDASE 72-RELATED 4 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme131459g00001 87 ProSiteProfiles Plant heme peroxidase family profile. 1 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131459g00001 Trme-Chr131459 112 537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131459g00001 4 87 Peroxidase AT4G08770 61.176 9.56e-29 103