Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131393g00001 ATGATGGCGAAAAGATATGAAGGAAATGCTGTGGGAATTGACCTTGGTACAACCTACTCGTGTGTTGCAGTGTGGCAAGAGCAACACAACAGAGTAGAGATTATTCACAATGAACAAGGCAACAAAACTACACCTTCTTGTGTTGCTTTCACTGACAAACAAAGGTTGATTGGTGAAACAGCTAAGAATCAAGCTGCTGCCAACCCACAAAATACTATCTTTGGTATATTCTATCATCCATTTACCTTCTCCGTACTGTTATTATACTACTACATTTATGACTTTTAG 288 0.3854 MMAKRYEGNAVGIDLGTTYSCVAVWQEQHNRVEIIHNEQGNKTTPSCVAFTDKQRLIGETAKNQAAANPQNTIFGIFYHPFTFSVLLLYYYIYDF 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131393g00001 95 PRINTS 70kDa heat shock protein signature 39 51 - -
Trme131393g00001 95 PRINTS 70kDa heat shock protein signature 9 22 - -
Trme131393g00001 95 PRINTS 70kDa heat shock protein signature 61 69 - -
Trme131393g00001 95 PANTHER HEAT SHOCK PROTEIN 70KDA 10 75 IPR013126 GO:0005524|GO:0140662
Trme131393g00001 95 FunFam heat shock 70 kDa protein-like 4 87 - -
Trme131393g00001 95 Gene3D - 2 78 - -
Trme131393g00001 95 SUPERFAMILY Actin-like ATPase domain 10 78 IPR043129 -
Trme131393g00001 95 Pfam Hsp70 protein 10 76 IPR013126 GO:0005524|GO:0140662
Trme131393g00001 95 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131393g00001 Trme-Chr131393 189 476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131393g00001 2 74 Calmodulin-binding Proteins AT3G12580 71.233 2.49e-31 113