Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131257g00001 ATGGATGATGACAAAGAATTAATGATGTCCCAGATGAATTTTGAGAAGAGATTTGGGCAGTCATCAATTTTTGTGACTTCAACCTTGATGGAAGAGGGTGGTGTACCTCCCTCCTCGAGTCCAGCAAGCCAGCTGAAAGAAGCTATTCATGTAATCAGTTGTGGATATGAAGATAAAACTGAATGGGGAATTGAGCTTGGTTGGATTTATGGGTCTATTACAGAGGACATTCTAACAGGCTTTAAGATGCATTGCCGTGGTTGGAGATCCATTTACTGTATGCCAAAGAGAGTAGCCTTCAAGGGTACTGCTCCTATCAACTTGTCAGATAGACTCAACCAGGTGCTTCGTTGGGCCCTTGGTTCCATTGAGATCTTCTTCAGTCATCACTGCCCTTTATG 401 0.4314 MDDDKELMMSQMNFEKRFGQSSIFVTSTLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131257g00001 133 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 133 - -
Trme131257g00001 133 Pfam Cellulose synthase 2 133 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131257g00001 Trme-Chr131257 40 541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131257g00001 2 133 Cell Wall Biosynthesis AT5G17420 89.394 1.51e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131257g00001 K10999 - gmx:100789821 271.552