Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13118g00001 ATGATTTTGGAACAGAAGCTATCTGTGCTTGAGAGGAGGAACGCTGAAGAGAGTAGTTCTCTTCAACGGAAATTTGAGCAAGAGCGCAAAGCTGTGAAGTCTGAAGTGTACGACCTTGAAAGAAAGCTAGAAGGGTATAGACAAGAATTAATGACTGCTAAGTCTATTATTTCAGTCAAGGACACCGAGTTGGCTGCACTGCAAAATAATTTCAAGGAATTGGAAGAATTGCGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCCGAAATGGAAGCTCTTTATAAGGAAGAACAAGTTTTAAGGAAGCGTTATTTTAATGTAATAGAAGACATGAAAGGCAAGATTCGAGTTTATTGTCGGCTAAGACCTCTTAGTGAAAAAGAGATTCTTGAGAAGGAAAGAGAAGCCGTTACTGCAGCTGACGAGTTTACTGTTGAGTTTCTATGGAAAGATGATAAGCCGAAGCAGTACATATACGATCGTGTTTTTGGCAGTGATGCAACTCAAGAAAGTTATTTGGTGCAATCTGCTGTAGATGGTTTTAATGTGTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACGTTTACAATCTATGGATCTGAAGATAATCCCGGGCTTACCCCTCGTGCAATTGGTGAACTTTTTAGAATTTTACGGAGAGATGGTAAAAAGTATTCCTTTTCCTTGAAG 741 0.3954 MILEQKLSVLERRNAEESSSLQRKFEQERKAVKSEVYDLERKLEGYRQELMTAKSIISVKDTELAALQNNFKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMEALYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEILEKEREAVTAADEFTVEFLWKDDKPKQYIYDRVFGSDATQESYLVQSAVDGFNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIGELFRILRRDGKKYSFSLK 247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme13118g00001 247 Pfam Microtubule binding 110 244 IPR031852 GO:0008017
Trme13118g00001 247 Coils Coil 22 49 - -
Trme13118g00001 247 Coils Coil 57 94 - -
Trme13118g00001 247 Gene3D Kinesin motor domain 72 247 IPR036961 -
Trme13118g00001 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 238 IPR027417 -
Trme13118g00001 247 ProSiteProfiles Kinesin motor domain profile. 129 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme13118g00001 247 SMART kinesin_4 127 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme13118g00001 247 PANTHER KINESIN-LIKE PROTEIN KLP-3 14 245 IPR027640 GO:0003777|GO:0007018
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme13118g00001 Trme-Chr13118 62 1333 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13118g00001 2 247 Calmodulin-binding Proteins AT5G65930 67.063 3.01e-107 334