Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131130g00001 GGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTCAGAAAACATTCAGGAATGGACTTGCAAATCGTCCCGGAAGTAACTACACGAGAACCGGAGACTTGGGACGAATAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAACATATACTCTTCTGATGTGGAAAAGACAATTGAGACTTCATCTGAATTTCTTCGTCCCGGATGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGGATTTCCATTCCTGAAGGTTCTGATCAGGTTGCCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAATCAGTTAGCAAAGATGTGATTGAGAACATTAAGGCGCGTGTGGCAGAAGAACATGGAGTTAGTCTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAGATCAAGAGATTTGAATGCATCAAACAATTTACAGATGAGACCCTTAACTTGGTACCTTTAG 565 0.423 GKEGEIWISSPSAGVGYWGREELSQKTFRNGLANRPGSNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSSDVEKTIETSSEFLRPGCCAVIGVPEEILSAKGISIPEGSDQVALVVIAEVRDGKSVSKDVIENIKARVAEEHGVSLASVKLIKPRTISKTTSGKIKRFECIKQFTDETLNLVPL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131130g00001 188 Gene3D - 1 60 IPR042099 -
Trme131130g00001 188 Gene3D - 61 186 IPR045851 -
Trme131130g00001 188 Pfam AMP-binding enzyme 1 66 IPR000873 -
Trme131130g00001 188 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 1 186 - -
Trme131130g00001 188 SUPERFAMILY Acetyl-CoA synthetase-like 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131130g00001 Trme-Chr131130 29 593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131130g00001 1 179 Monolignol Biosynthesis Gene Families AT1G20500 27.778 8.04e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131130g00001 - - tpra:123914735 367.466