Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131102g00001 TGCAGATCTGATGAGAAAAAGGCATCTATTGCCATATGTGATAAGATGAACTTAAAAGGCTATCAAATGGGGAAAACAAAGGTGTTTCTTAGAGCTGGTCAGATGGCTGAATTAGATGCTCGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAGACTCATACAGAGACAAATCCGAACACATTTAGCCCGAAAAGAGTTCATCACCATGAAAAAGGCCACAATTCGTATCCAGAAGATTTGGAGAGGTCACTTTCTTCAAAGCAACTTGTGTGTTTTAGTACTTGTTCATTCTCCCTTTGCTTAA 303 0.3993 CRSDEKKASIAICDKMNLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARLIQRQIRTHLARKEFITMKKATIRIQKIWRGHFLQSNLCVLVLVHSPFA 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131102g00001 100 ProSiteProfiles IQ motif profile. 46 73 IPR000048 GO:0005515
Trme131102g00001 100 PANTHER MYOSIN 8 80 - -
Trme131102g00001 100 Pfam IQ calmodulin-binding motif 71 86 IPR000048 GO:0005515
Trme131102g00001 100 Pfam IQ calmodulin-binding motif 48 66 IPR000048 GO:0005515
Trme131102g00001 100 ProSiteProfiles IQ motif profile. 69 98 IPR000048 GO:0005515
Trme131102g00001 100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 93 IPR027417 -
Trme131102g00001 100 ProSiteProfiles Myosin motor domain profile. 1 43 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme131102g00001 100 Coils Coil 35 55 - -
Trme131102g00001 100 Gene3D - 1 41 - -
Trme131102g00001 100 Gene3D - 43 91 - -
Trme131102g00001 100 SMART iq_5 68 90 IPR000048 GO:0005515
Trme131102g00001 100 SMART iq_5 45 67 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131102g00001 Trme-Chr131102 1 408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131102g00001 3 82 Myosins gene family AT2G31900 72.500 6.79e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131102g00001 K10357 - gmx:100786418 144.436