Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme131068g00001 ACTAATCAGCAACAATCACAGCAATCAGTGGAGACCAATATTCAACATCTAAACCATGACAAGTTTAGATCCAATATAAGCTCAAATTTTCATCAGAACATTACCCTTCCAAAAGAAACATACCAGCAGGTCACTGAACCTTGTAAGACGGCACAGCAGAACATGGAAGAGGATCAAAAAGCTCTAACACCATCCACAATGAATGCTGATAAACCTTCTTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGCACACATCCTAACTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTTGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAATCATGGAAAGCCGCAACTTCAAAAGCGTAACGCGGGAGCGGCACAAGGATCAGGAATGGTTTCTGATGGATTGGTTCAAGATATATTGAATAATAATCAGAATGAAAGGATTGAAGGAAGAATGGAGAATCATGTCAAAGCTTCACA 530 0.3811 TNQQQSQQSVETNIQHLNHDKFRSNISSNFHQNITLPKETYQQVTEPCKTAQQNMEEDQKALTPSTMNADKPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGEIAEIVYKGEHNHGKPQLQKRNAGAAQGSGMVSDGLVQDILNNNQNERIEGRMENHVKAS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme131068g00001 176 MobiDBLite consensus disorder prediction 53 79 - -
Trme131068g00001 176 FunFam WRKY transcription factor 57 133 - -
Trme131068g00001 176 SUPERFAMILY WRKY DNA-binding domain 70 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme131068g00001 176 SMART WRKY_cls 73 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme131068g00001 176 MobiDBLite consensus disorder prediction 53 72 - -
Trme131068g00001 176 MobiDBLite consensus disorder prediction 126 147 - -
Trme131068g00001 176 ProSiteProfiles WRKY domain profile. 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme131068g00001 176 Pfam WRKY DNA -binding domain 75 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme131068g00001 176 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 145 IPR044810 GO:0003700
Trme131068g00001 176 Gene3D WRKY domain 57 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme131068g00001 Trme-Chr131068 66 595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme131068g00001 68 148 WRKY Transcription Factor Family AT2G03340 69.136 3.83e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme131068g00001 WRKY 6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme131068g00001 - - gmx:100794069 247.284