Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130919g00001 ATGCGTATCAACCCAGATGAAGCTGTTGCTTATGGTGCAGCTGTTCATGCGGCTATTTTGAGTGAAGGCTTTAAGAATGGAGAGAGAGCACGAGCTCCTGACAATAATCTGCTAGGTTCATTTGTTCTTTCTTGTCGTCCAAATGCTCCCCGTGGCACCCCGTTGGATGTATGCTTTTCTATCAATGAAAATGGCATCTTAACTGTTTCTGCTAAGGAAATATCTACTGGTAATATGAATGAGATCACCATAACAAATGACAAAGAAAGGTTGAAAACATTGGAAATTAAAAAAATGATTGAGGAAGCTGAGAAATACCATGTGGAAGATATGAAATTTTTAAGGAAGGCCAAG 354 0.3927 MRINPDEAVAYGAAVHAAILSEGFKNGERARAPDNNLLGSFVLSCRPNAPRGTPLDVCFSINENGILTVSAKEISTGNMNEITITNDKERLKTLEIKKMIEEAEKYHVEDMKFLRKAK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130919g00001 118 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 16 118 IPR029047 -
Trme130919g00001 118 PANTHER HEAT SHOCK PROTEIN 70KDA 26 109 IPR013126 GO:0005524|GO:0140662
Trme130919g00001 118 Pfam Hsp70 protein 26 114 IPR013126 GO:0005524|GO:0140662
Trme130919g00001 118 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 26 115 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130919g00001 Trme-Chr130919 43 573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130919g00001 27 116 Calmodulin-binding Proteins AT3G12580 60.440 1.69e-28 106