Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130874g00001 GCTTTGAAGATATTGTTACCCGCTGAACGCAAACTCTGCGATCGCGTTTTCTTTGGGTTCTCCTCCACTGCTGATTTATCATTTACGGATGTTTGTAGGGAATCCACACTTCAGCTGCTCAATTTCGCGGATGCTATTGCTATTGGAAGCCGATCGCCTGAACGGTTGCCTAGAGTCCTCAACATGTTTGAAACAATGCGTGACCACCTAATTCCAGAGTTTGAGTCTATGTTCCGTGATCAATACAGTGGGTTGCTGCGAAGCAAAGCAACCACAGTTTGGAAGATATTGGGGGAAGCGATCAGAGGTATTTTCATGGAGTTTACGAATCTGATTCGGCAAATTTCACTGGAGGAAGTGAATCTCGAAGGTGAACTTCACCCGATTACCAGTTACGTGATGAATTATCTCTGTGCTGCTTGTCGGTCACGGAAGACCCTGGAGCAAGTGTTTGAAGGAGATTATGGGGTTCCATCGAAGGAATATCCTAAAATTGAGGATAGAGTGCATTCCTCTTCCAATCTCTCAGAGCAGATGGGTTTGATTATGGGGCTATTAGAGAGCAAGTTGATAGCCGAATCCAAACTCCATAA 593 0.4503 ALKILLPAERKLCDRVFFGFSSTADLSFTDVCRESTLQLLNFADAIAIGSRSPERLPRVLNMFETMRDHLIPEFESMFRDQYSGLLRSKATTVWKILGEAIRGIFMEFTNLIRQISLEEVNLEGELHPITSYVMNYLCAACRSRKTLEQVFEGDYGVPSKEYPKIEDRVHSSSNLSEQMGLIMGLLESKLIAESKLH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130874g00001 197 Gene3D Exocyst complex component Exo70 1 197 - -
Trme130874g00001 197 Pfam Exo70 exocyst complex subunit 1 196 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme130874g00001 197 SUPERFAMILY Cullin repeat-like 1 195 IPR016159 -
Trme130874g00001 197 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 196 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130874g00001 Trme-Chr130874 3 595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130874g00001 1 197 EXO70 exocyst subunit family AT5G58430 64.975 6.70e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme130874g00001 K07195 - tpra:123922987 303.138