Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme130874g00001 | GCTTTGAAGATATTGTTACCCGCTGAACGCAAACTCTGCGATCGCGTTTTCTTTGGGTTCTCCTCCACTGCTGATTTATCATTTACGGATGTTTGTAGGGAATCCACACTTCAGCTGCTCAATTTCGCGGATGCTATTGCTATTGGAAGCCGATCGCCTGAACGGTTGCCTAGAGTCCTCAACATGTTTGAAACAATGCGTGACCACCTAATTCCAGAGTTTGAGTCTATGTTCCGTGATCAATACAGTGGGTTGCTGCGAAGCAAAGCAACCACAGTTTGGAAGATATTGGGGGAAGCGATCAGAGGTATTTTCATGGAGTTTACGAATCTGATTCGGCAAATTTCACTGGAGGAAGTGAATCTCGAAGGTGAACTTCACCCGATTACCAGTTACGTGATGAATTATCTCTGTGCTGCTTGTCGGTCACGGAAGACCCTGGAGCAAGTGTTTGAAGGAGATTATGGGGTTCCATCGAAGGAATATCCTAAAATTGAGGATAGAGTGCATTCCTCTTCCAATCTCTCAGAGCAGATGGGTTTGATTATGGGGCTATTAGAGAGCAAGTTGATAGCCGAATCCAAACTCCATAA | 593 | 0.4503 | ALKILLPAERKLCDRVFFGFSSTADLSFTDVCRESTLQLLNFADAIAIGSRSPERLPRVLNMFETMRDHLIPEFESMFRDQYSGLLRSKATTVWKILGEAIRGIFMEFTNLIRQISLEEVNLEGELHPITSYVMNYLCAACRSRKTLEQVFEGDYGVPSKEYPKIEDRVHSSSNLSEQMGLIMGLLESKLIAESKLH | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme130874g00001 | 197 | Gene3D | Exocyst complex component Exo70 | 1 | 197 | - | - | |
| Trme130874g00001 | 197 | Pfam | Exo70 exocyst complex subunit | 1 | 196 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
| Trme130874g00001 | 197 | SUPERFAMILY | Cullin repeat-like | 1 | 195 | IPR016159 | - | |
| Trme130874g00001 | 197 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 1 | 196 | IPR004140 | GO:0000145|GO:0006887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme130874g00001 | Trme-Chr130874 | 3 | 595 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme130874g00001 | 1 | 197 | EXO70 exocyst subunit family | AT5G58430 | 64.975 | 6.70e-79 | 245 |