Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13077g00001 ATGGTAGAGAAGTTCCTGACTGTACCACCATTTGAGTGTGCGTGGCGAGAGGATTTAAAATTCCAGGAAGCAGGTAGGGGATGTGTGGCTTTTGATGCATTTGCCTGCAACGATGTCACTTTGGTTTTTAGGGAGAATGTGGGAAGCCAAGGGTACCACTACAAAAGAGATAGCAGTCCTCACTACACAATCATATTGGGGAGTCATAGGAATCGACGCCTCAGAATTGAGGTCAACGGTAAAACTGTTGTTGATGCGGCAGGGGTTGGTCTCTGCTGTTCCAACTCGTTTCAGAGTTATTGGATCAGTATCTACGATGGCTTCATCAGCATTGGTAATGGGAAATACCCTTTCCAGGATGTTGTCTTCCAGTGGTCTGATTCTCATCCCAATTGTAACGTTCAGTATATTGGCCTCAGTAGTTGGGATAAACATGTTAAGTACAGAAATGTTAATGTCCTCTCATTAACACACACTCTTATGCCCTTATCCAAGCATATGCTTTTTGGTGATTATCAAGTTGAGGAGGATGATGTTGCTGCTACTGCTGACAAACAGTTGCATATGGACTATGACAATTGGGGCCTCAAAAATTTTCTGGAGAGTTGGGACTTGTCTGATATGTTATTCATCGTTGGTCCAGAGGAAAGACCTGTTCCTGCTCACAAGTCTATTTTAGCTGCTTCTGGAAACTTCCCTTTCTGCTCCTCCTTTGCCATTACACTTCCCACTGTTTCTTATCAGCTTCTCCATGCACTGCTTCACTACATCTACACTGGCTGGACCGAG 789 0.4423 MVEKFLTVPPFECAWREDLKFQEAGRGCVAFDAFACNDVTLVFRENVGSQGYHYKRDSSPHYTIILGSHRNRRLRIEVNGKTVVDAAGVGLCCSNSFQSYWISIYDGFISIGNGKYPFQDVVFQWSDSHPNCNVQYIGLSSWDKHVKYRNVNVLSLTHTLMPLSKHMLFGDYQVEEDDVAATADKQLHMDYDNWGLKNFLESWDLSDMLFIVGPEERPVPAHKSILAASGNFPFCSSFAITLPTVSYQLLHALLHYIYTGWTE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13077g00001 263 PANTHER OS05G0345500 PROTEIN 3 262 - -
Trme13077g00001 263 Pfam Farnesoic acid 0-methyl transferase 50 146 IPR022041 -
Trme13077g00001 263 SUPERFAMILY POZ domain 194 261 IPR011333 -
Trme13077g00001 263 Pfam BTB/POZ domain 196 260 IPR000210 GO:0005515
Trme13077g00001 263 ProSiteProfiles BTB domain profile. 206 263 IPR000210 GO:0005515
Trme13077g00001 263 Gene3D Potassium Channel Kv1.1; Chain A 185 263 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme13077g00001 Methyltransf_FA 1.3e-23 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13077g00001 - - gmx:100810794 467.618