Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130664g00001 ATGGATGGACAAGCGTCGACAGAATTTCTTTGCGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGGTGCGGTTGATTGGATATTGCGTTGAGGGATCACTTTTCCTTGTATATGAACATATTGACAATGGAAACTTGGGTCAATATTTGCACGGAATAGGTAAAGAACCATTACCATGGTCAAGTAGAGTTCAAATTGCTCTAGATTCAGCAAGAGGCC 226 0.4071 MDGQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGIGKEPLPWSSRVQIALDSARG 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130664g00001 75 ProSiteProfiles Protein kinase domain profile. 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme130664g00001 75 Pfam Protein tyrosine and serine/threonine kinase 4 75 IPR001245 GO:0004672|GO:0006468
Trme130664g00001 75 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Trme130664g00001 75 SUPERFAMILY Protein kinase-like (PK-like) 4 75 IPR011009 -
Trme130664g00001 75 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 75 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130664g00001 Trme-Chr130664 1 472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130664g00001 1 75 Receptor kinase-like Gene Family AT3G21630 80.000 2.93e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme130664g00001 PK_Tyr_Ser-Thr 6.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme130664g00001 - K13429 tpra:123921801 153.295