Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130639g00001 ATGCATGACATTATACAAGAATTGGGTCGGGAGATTGTTCGCCAAGAATCTAGTGAAGATCTTAGAAAACGCAGTCGATTATGGGATACTGATGAAATTTGTGATGTATTGAAAAATGACAAGGGTACTGAGGCTATTAGAAGCATAAGTGCAGACTTGTCATCAATTAGGAAACTGAAGTTAAGCCCTCGTGTATTTGCTAATATGGCCAACCTGCAGTTTTTGGAATTTCGTGGTGAATACGACGAATACTGTTTGGATCTTCTTCCTCAAGGGCTTCAATCTTTTCCAACAGATATCAGATATCTTCATTGGATACATTACCCTCTAAAATCATTCCCAGAGAATTTTTCTGCAGAGAATCTTGTTATATTGGATTTGTCATATAGCCTAGTGGAAAAGCTTTG 407 0.3759 MHDIIQELGREIVRQESSEDLRKRSRLWDTDEICDVLKNDKGTEAIRSISADLSSIRKLKLSPRVFANMANLQFLEFRGEYDEYCLDLLPQGLQSFPTDIRYLHWIHYPLKSFPENFSAENLVILDLSYSLVEKL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130639g00001 135 SUPERFAMILY L domain-like 50 133 - -
Trme130639g00001 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 135 IPR044974 GO:0006952
Trme130639g00001 135 Gene3D Ribonuclease Inhibitor 31 135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130639g00001 Trme-Chr130639 12 521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130639g00001 1 135 WRKY Transcription Factor Family AT4G12020 44.853 1.40e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme130639g00001 - - tpra:123920755 222.631