Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13053g00001 AAGGTTGCAAAGAGAAAGCTTGGAACACACAAGCGTGCCAAGAAGAAGAGAGAGGAGATGTCTAATGTTCTCAGGAAGATGAGGGCTGGTGGAGCCGGAGACAAAAAGAAATAG 114 0.4649 KVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 37
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13053g00001 37 MobiDBLite consensus disorder prediction 1 37 - -
Trme13053g00001 37 PANTHER 60S RIBOSOMAL PROTEIN L36 1 35 IPR000509 GO:0003735|GO:0005840|GO:0006412
Trme13053g00001 37 Pfam Ribosomal protein L36e 1 28 IPR000509 GO:0003735|GO:0005840|GO:0006412
Trme13053g00001 37 Gene3D 60S ribosomal protein L36 1 36 IPR038097 -
Trme13053g00001 37 MobiDBLite consensus disorder prediction 14 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13053g00001 Trme-Chr13053 2 238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13053g00001 1 37 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.784 7.48e-15 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13053g00001 K02920 - gmx:100526979 75.8701