Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130457g00001 GCCAAGTCAATAGCTTTTGAGAATACTGCTGGTCCAGGAGGTGCACAAGCAGTAGCACTCCGTGTTGCCGGTAATTACTCCGCATTCTTCAACTGTGCATTTCGTGGCTATCAAGACACACTGTATGTTGACCAGGGCCATCAGTTCTACCGCAATTGTGAAATCGCTGGAACCATCGATTTCATTTATGGTCAATCAAGCACCTTAATCCAAAACTCTACAATTTTGGTGAGAAATCCCGCTCAAGGACAACAAAATGTTGTGGTGGCAGATGGTACTTTCCAATTCAATAAGTTCAGAACTGGTATAGTCCTTCAGAATTGCTCCATCATACCCGATGTTGATCTCAAACCTTATCTACAAATAGTGAAGACTTACCTTGCAAGACCGTGGAAGCCATTTTCAACGGCAGTCTTCATCAACAATTACATTGATGGTTTTGTACAACCGGAAGGATATATGATATGGAATGAGACTCATCCTAACACAGAAAACTCTTATTTTGCGGAGTTTGGAAATATTGGACCTGTTGCCAAGACTACAACAAGAGTAAAATGGGCTAAGGGCCTTATAAGCAAGAAGGCGGCTTCTATATT 596 0.4195 AKSIAFENTAGPGGAQAVALRVAGNYSAFFNCAFRGYQDTLYVDQGHQFYRNCEIAGTIDFIYGQSSTLIQNSTILVRNPAQGQQNVVVADGTFQFNKFRTGIVLQNCSIIPDVDLKPYLQIVKTYLARPWKPFSTAVFINNYIDGFVQPEGYMIWNETHPNTENSYFAEFGNIGPVAKTTTRVKWAKGLISKKAASI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130457g00001 198 PANTHER PECTINESTERASE 1 188 - -
Trme130457g00001 198 Pfam Pectinesterase 1 188 IPR000070 GO:0030599|GO:0042545
Trme130457g00001 198 Gene3D - 1 198 IPR012334 -
Trme130457g00001 198 SUPERFAMILY Pectin lyase-like 2 188 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130457g00001 Trme-Chr130457 1 596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130457g00001 1 198 Carbohydrate Esterase AT3G62170 51.010 1.33e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme130457g00001 K01051 - gmx:100775225 255.373