Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1303402g00001 ATGCACTTCCACGATTGTTTTGTCCGAGGTTGTGACGCTTCTGTGCTAATTGATGGTTCTAACACTGAGAAAACAGCAATTCCAAACCTTGGTTTAAGAGGTTACGAGGTTATTCATGACGCTAAGGAAAAGCTTGAGGCTGCATGTCCAG 151 0.4371 MHFHDCFVRGCDASVLIDGSNTEKTAIPNLGLRGYEVIHDAKEKLEAACP 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1303402g00001 50 Pfam Peroxidase 1 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme1303402g00001 50 SUPERFAMILY Heme-dependent peroxidases 1 50 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme1303402g00001 50 Gene3D - 1 50 - -
Trme1303402g00001 50 ProSiteProfiles Plant heme peroxidase family profile. 1 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme1303402g00001 50 PANTHER PEROXIDASE 25-RELATED 1 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1303402g00001 Trme-Chr1303402 18 168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1303402g00001 1 50 Peroxidase AT5G64120 72.000 1.19e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1303402g00001 K00430 - qsu:111999598 97.8265