Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme130313g00001 GTTGCAGTGAGGAAAGAGAAAGTGGAATCACAGGGGCGTGGCCTAGGCTCCAAGGGAACTAAACTTCCTTTGCTGACCAATCATTTTAAAGTCAATGTTGAAAACACTGATGGATACTTCTTCCAGTACAGTGTGGCTTTATTTTATGAAGATGGACGCCCTGTTGAAGGCAAAGGTGCTGGTAGGAAGATACTTGACAGAGTTCAAGAGACATATAATTCTGAGCTTAATGGAAAGGACATTGCCTATGATGGAGAAAAAACTCTGTTCACTATTGGCTCTTTAGCCCAGAACAAGCTTGAGTTTAAAGTTGTTCTTGAGGATGTTGCATCAAACAGGAACAATGGAAACTGC 354 0.4181 VAVRKEKVESQGRGLGSKGTKLPLLTNHFKVNVENTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYNSELNGKDIAYDGEKTLFTIGSLAQNKLEFKVVLEDVASNRNNGNC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme130313g00001 118 Pfam N-terminal domain of argonaute 21 108 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme130313g00001 Trme-Chr130313 244 597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme130313g00001 14 108 Eukaryotic Initiation Factors Gene Family AT1G48410 31.250 2.12e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme130313g00001 K11593 - gmx:100779439 185.652